Science and Ontology. Rolfe A. Leary

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1 Science and Ontology Rolfe A. Leary 1

2 Semantics Words/ Symbols Ontology Objects/ Properties Things/ of Objects/ Systems Things/ Systems Constructs Epistemology Logic Ethics 2

3 1. Central event or system or process Conceptual 5. System component/ thing,properties,concepts 2. Statements / Questions to focus research Methodological 9. Experimental/sampling design 10. Measurements/data 6. Scientific hypotheses/ propositions 7. Deductions from sci.hypo/ Scientific inference 3. Literature / references 11. Mathematical analysis of data 12. Statistical hypotheses & tests Statistical methods references 8. Factual science references 14. Intended outlet 4. Problem statements (What are the knowns and the unknowns?) 3

4 Conceptual 1. Central event or system or process Methodological 5. System component properties, concepts 9. Experimental/sampling design 10. Measurements/data 6. Scientific hypotheses/propositions 11. Mathematical analysis of data 7. Deductions from sci. hypo/ Scientific inference 3. Literature/ references 12. Statistical hypotheses & tests.. 8. Factual science references 13. Statistical methods references 14. Intended outlet 4. Problem statements (knowns & unknowns) 4

5 Ontology in scientific research: ontos to be logia the study of Ontology is the study of being, of what exists, and how it is organized, or can be organized. 5

6 What does ontology have to do with (anything in) life? 1. Everyone has an ontological perspective 6

7 What does ontology have to do with (anything in) life? 1. Everyone has an ontological perspective 1. Your ontological perspective is the furniture in your world [M. Bunge] 7

8 What does ontology have to do with (anything in) life? 1. Everyone has an ontological perspective 2. Your ontological perspective is the furniture in your world [M. Bunge] 3. The furniture in your world ensures you follow certain paths between pieces probably over and over again. 8

9 9

10 Konrad Lorenz ( ) Nobel prize Austrian evolutionary ontologist. 10

11 L. von Bertalanffy A dominant ontological view is that of systems. But this is fairly recent post WWII L. von Bertalanffy s contributions h' h h 11

12 Mario Bunge contributions to ontology : Vol 3: Ontology I: The furniture of the world 1. Substance 2. Form 3. Thing 4. Possibility 5. Change** 6. SpaceTime 12

13 Mario Bunge contributions to ontology : Vol 3: Ontology I: The furniture of the world 1. Substance 2. Form 3. Thing 4. Possibility 5. Change 6. SpaceTime Vol 4: Ontology II: A world of systems 1. System 2. Chemism 3. Life 4. Mind 5. Society 6. A Systemic World View 13

14 Forest land ontologies compared: Commodity (former perspective) natural systems (recent perspective) 14

15 In a systems ontology any chunk of what is out there can be grouped (roughly) into 3 parts: 1. The composition (things strongly interacting) 2. The structure (the connections among things in the composition) 3. The environment (the rest of the things out there that are less strongly interacting) 15

16 What is needed is some rhyme or reason for selecting the items to place in the system s parts: 1. Composition (nodes) 2. Structure (arcs connecting nodes) 3. Environment (nodes) 16

17 There are at least 2 strategies for specifying the system : a) Narrow down from all possible arcs to identify subsystems to focus on? b) Build up from blank -- by forming an arc node representation of system? 17

18 Strategy 1a: Begin with nodes and all possible connections: 18

19 Strategy 1b: Begin with no connections and build up -- by forming an arc node representation of system? : 19

20 20

21 21

22 Nodes [1,2,3,4,6,7] Node [5] system Composition system Environment. You may want to develop a mathematical equation for each element in the Composition that reflects node interdependence (Structure) But just measure elements in Environment to have a time series on that node. 22

23 d1 dt f 1 (1,2,3,4,5,6,7) d 2 dt f 2 (1,2,3,4,5(t),6,7) d 3 dt f 3 (1,2,3,4,5,6,7) f 4 (1,2,3,4,5(t),6,7) d 4 dt d 6 dt f 6 (1,2,3,4,5,6,7) d 7 dt f 7 (1,2,3,4,5,6,7) 23

24 HOWEVER: The world: is so complex, and can be studied from many perspectives, I ve come to believe the <composition, structure, environment> schema is often too simple to communicate the ontological perspective one is pursuing. 24

25 The concepts of Level and Order of Interaction are also useful in provide a starting point in implementing an alternative Systems ontological framework: 25

26 Levels 26

27 27

28 28

29 29

30 30

31 31

32 The levels systems ontological perspective poses the same issues as the arc-node perspective: 1) Should I begin with every triangle delineated and omit those not being considered, or 2) Should I begin with a blank larger triangle and delineate only those triangles that form my system. 32

33

34 Bio-Bio Geo-Bio Geo-Geo

35 H-H Bio-Bio H-B Geo-Bio H-G Geo-Geo

36 There are some advantages to working with larger blocks: a) Including ALL triangles (>half of which are empty) seems to confuse rather than clarify. b) The entire range of possible levels is still there, and omissions of components may be more easily spotted and corrected. 36

37 Study 37

38 Study 38

39 39

40 3-cell study 40

41 Habitat research program 41

42 Coenose research program 42

43 43

44 Most treatments are applied in 0-order cells. 44

45 Aspen FACE (Free-Air Carbon Dioxide Enrichment) Experiment Example of a 3 rd order treatment cell. 45

46 46

47 47

48 Source: FACE website 48

49 Haines fire index 49

50 Zambia Draft Animal Project Heifer International 50

51 Worku Tegegne pets his cow in Ghibe Valley, southwest of Addis Ababa, Ethiopia, which is suffering from bovine trypanosomiasis, transmitted by tsetse flies. Marthe Van Der Wolf Voice of America November 14,

52 Zambia Draft Animal Project Heifer International 52

53 Zambia Draft Animal Project Heifer International 53

54 Western corn rootworm 54

55 Western corn rootworm 55

56 Borrow a concept from physics, and have plant as test body in a force field. Ecological classification schemes use this strategy look to the vegetation to understand the physical system. Examples are: -- habitat types -- synecologcal coordinates 56

57 Facts: 1. research resources are limited. 2. can t measure / assess every triangle state. 3. must group triangles or perhaps completely ignore some. Questions: 1) Which triangles to ignore? 2) Which triangles to group? 3) How best to group? There can be dangers in over-grouping in an era of global environmental change. 57

58 Global temperature trends:

59 Conceptual Methodological 4 4. "Problem statement (what are the knowns and the unknowns?) Expressed in words, not equations!! What might we know? a) Where, b) When, What might we not know? a) Where, d) What if, b) When, e) Why, c) What is the f) How to, character of.., 59

60 Takeaways (Aware, Understand, Appreciate): S/he with the superior ontological perspective [o.p.] will win sooner or later 1. Aw.. that ontological perspectives exist 2. Un.. some of range available 3. Un.. where yours fits in 4. Ap.. strengths and weaknesses of each 5. Un.. o.p. aren t directly testable like propositions 60

61 Conceptual 1. Central event or system or process Methodological 5. System component properties, concepts 9. Experimental/sampling design 10. Measurements/data 6. Scientific hypotheses/propositions 11. Mathematical analysis of data 7. Deductions from sci. hypo/ Scientific inference 3. Literature/ references 12. Statistical hypotheses & tests.. 8. Factual science references 13. Statistical methods references 14. Intended outlet 4. Problem statements (knowns & unknowns) 61

62 Thank You 62

63 E. V. Bakuzis U. Minnesota Acknowledgements:

64 W.E. Miller Don Haines Richard Dickson Mario Bunge

65 Fellow employee retirement gift: I act in accord with what I value. To do otherwise would be irrational. I value only things I think exist. To do otherwise would be delusional. What exists I organize using principles from ontology. Therefore I act out my ontological perspective. 65

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